Function to sync and get the most updated Rcwl recipes from the RcwlRecipes github

cwlUpdate(cachePath = "Rcwl", force = FALSE, branch = NULL)

Arguments

cachePath

The cache path of the BiocFileCache object to store the Rcwl tools and pipelines recipes.

force

Whether to clean existing recipes cache.

branch

The branch of github recipes repository. It can be "master" and "dev". "force = TRUE" is recommended when swithing branch.

Examples

if (FALSE) { tools <- cwlUpdate() }