searchContainer.RdTo search container images for a tool in certain repository from quay.io or dockerhub.
searchContainer(tool, repo = "biocontainers", source = c("quay", "dockerhub"))
| tool | The tool to search. |
|---|---|
| repo | The repository to lookup. |
| source | The container server to search, quay.io or dockerhub. |
A DataFrame contains image tag names, updated dates and image sizes.
searchContainer("samtools")#> DataFrame with 72 rows and 5 columns #> tool repo name #> <character> <character> <character> #> 0.1.16 samtools biocontainers 0.1.16 #> 0.1.18--hfb9b9cc_10 samtools biocontainers 0.1.18--hfb9b9cc_10 #> 1.11--h6270b1f_0 samtools biocontainers 1.11--h6270b1f_0 #> 0.1.19--hfb9b9cc_8 samtools biocontainers 0.1.19--hfb9b9cc_8 #> 1.10--h2e538c0_3 samtools biocontainers 1.10--h2e538c0_3 #> ... ... ... ... #> 1.3.1--4 samtools biocontainers 1.3.1--4 #> 1.3.1--3 samtools biocontainers 1.3.1--3 #> 1.3.1--2 samtools biocontainers 1.3.1--2 #> 1.3--1 samtools biocontainers 1.3--1 #> 1.0--0 samtools biocontainers 1.0--0 #> last_modified size #> <character> <character> #> 0.1.16 Wed, 27 Jan 2021 19:.. 4320268 #> 0.1.18--hfb9b9cc_10 Sun, 22 Nov 2020 21:.. 14096858 #> 1.11--h6270b1f_0 Sun, 04 Oct 2020 13:.. 31568504 #> 0.1.19--hfb9b9cc_8 Mon, 31 Aug 2020 12:.. 21277432 #> 1.10--h2e538c0_3 Mon, 31 Aug 2020 12:.. 31458278 #> ... ... ... #> 1.3.1--4 Wed, 28 Sep 2016 12:.. 10747078 #> 1.3.1--3 Sun, 25 Sep 2016 00:.. 10747102 #> 1.3.1--2 Sat, 03 Sep 2016 20:.. 11558720 #> 1.3--1 Thu, 10 Mar 2016 09:.. 5174825 #> 1.0--0 Thu, 10 Mar 2016 09:.. 4914070