bowtie2_index
Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. bowtie2-build
is used to build the index files.
Recipe source code: https://github.com/rworkflow/ReUseDataRecipe/blob/master/bowtie2_index.R (opens new window)
Data source: https://bowtie-bio.sourceforge.net/bowtie2/index.shtml (opens new window)
plot

| label | type | description |
genome | reference genome | File | The reference genome file |
Outputs
| label | type | description |
btIdx | bowtie2 index | File[] | A list of bowtie index files |
Example: