ensembl_liftover
Download and unzip genome liftover file from Ensembl
Recipe source code: https://github.com/rworkflow/ReUseDataRecipe/blob/master/ensembl_liftover.R (opens new window)
Data source: https://ftp.ensembl.org/pub/assembly_mapping/ (opens new window)
plot

| label | type | description |
species | species | string | 'human' or 'mouse', which maps to the 'homo_sapiens' or 'mus_musculus' folder under source URL |
from | from | string | original genome build (case sensitive, must match source URL) |
to | to | string | target genome build (case sensitive, must match source URL) |
Outputs
| label | type | description |
liftover | liftover | File[] | the unzipped liftover file: ${from}_to_${to}.chain |
Example: