# LoFreqSI
Recipe source code: https://github.com/rworkflow/RcwlRecipes/blob/master/Rcwl/pl_LoFreqSI.R (opens new window)
# plot
# Inputs
| label | type | description | |
|---|---|---|---|
| tbam | File | ||
| nbam | File | ||
| ref | File | ||
| region | File | ||
| dbsnp | File | ||
| out | string | ||
| threads | int |
# Outputs
| label | type | description | |
|---|---|---|---|
| snp | File | ||
| snpdb | File | ||
| indel | File | ||
| indeldb | File |
# steps
| label | doc | |
|---|---|---|
| tbamR | ||
| nbamR | ||
| lofreqCall |
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