# ScarHRD
Recipe source code: https://github.com/rworkflow/RcwlRecipes/blob/master/Rcwl/pl_ScarHRD.R (opens new window)
# plot
# Inputs
| label | type | description | |
|---|---|---|---|
| normal | File | ||
| tumor | File | ||
| ref | File | ||
| gc | File | ||
| out | string | ||
| window | int | ||
| build | string |
# Outputs
| label | type | description | |
|---|---|---|---|
| segs | File | ||
| score | File |
# steps
| label | doc | |
|---|---|---|
| bam2seqz | ||
| seqz_binning | ||
| hrd |
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