lumpy
Recipe source code: https://github.com/rworkflow/RcwlRecipes/blob/master/Rcwl/pl_lumpy.R (opens new window)
plot
| label | type | description |
|---|
| bam | | File[] | |
Outputs
| label | type | description |
|---|
| vcf | | File | |
steps
| label | doc |
|---|
| discord | | |
| sam | | |
| split | | |
| sam2bam | | |
| discord_idx | | |
| split_idx | | |
| lumpy | | |