# STARsolo2sce
Recipe source code: https://github.com/rworkflow/RcwlRecipes/blob/master/Rcwl/pl_STARsolo2sce.R (opens new window)
# plot
# Inputs
| label | type | description | |
|---|---|---|---|
| fastq_cdna | File[] | ||
| fastq_cb | File[] | ||
| genomeDir | Directory | ||
| whiteList | File | ||
| runThreadN | int | ||
| soloCellFilter | string |
# Outputs
| label | type | description | |
|---|---|---|---|
| sam | File | ||
| Solo | Directory | ||
| sce | File |
# steps
| label | doc | |
|---|---|---|
| STARsolo | ||
| counts2sce |